Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015795761.1_cds_XP_016445719.1_3981
CDS Infomation

[gene=LOC107770902] [db_xref=GeneID:107770902] [protein=indole-3-acetic acid-amido synthetase GH3.6-like] [protein_id=XP_016445719.1] [location=complement(join(140049..140635,140741..141654,141993..142324))] [gbkey=CDS]
Sequence

ATGGAGAAAACCATACCTGGTAGAGAGGACAACAAGAAATCCACTGATTGTAGTATCGCA
GAGGACAACAAGGCGGTTCTTCAGTTCATTGAAGAAGTCACTACCAACGTTGACGAGGTC
CAAAAGAGAGTTCTTGCTGAAATCCTCTCGAGGAATGCCAATGTTGAGTACTTGCAGCGT
CATAATCTCAACGGTCACACTGATAGAGAGACGTTCAAGAAAGTCATACCTGTCATCACC
TATGAAGATATTCAGCCTGATATCAACCGTATAGCAAATGGTGATAAATCTCCAATCCTC
TGCTCCCAACCCATCTCTGAATTCTTCACAAGTTCTGGGACGTCCGGAGGGGAGAGAAAG
TTGATGCCAATAATAGAGGAAGATTTTGGGAGGAGATCACAGCTATACAACCTTATGATA
TCTGTGGTGAGCCAATCTTTTCCAGATTTGGAAAAGGGCAAAGGAATGTATTTCATGTTC
GTAAAGTCTGAGGCAAAGACCCCAGGAGGATTACTAGCTCGCCCTGCTTTAACTAGTATT
TTCAAGAGGCCTCATTTCCTCAACTCAAACCACACCAGCCCAATTGAGACTATTCTCTGC
CTAGACTCTTATCAGAGCATGTACTCCCAAATGCTTTGTGGCCTCTGCCAAAACAAAGAA
GTCCTACATGTAGGTGCGGTGTTTGCATCCGCCTTCATCCGTGCCATGCGATTCTTGGAG
AAGCACTGGTCTCTACTTTGTAACGATATCCGAACTGGAACCATTAACGCACAAATTACT
GATCCTGCAGTGAGAGAAGCAGTGATGAAAATCCTAAAACCTGACCCAGAGTTAGCTGAT
TTTATTGAGGCTGAATGCAGCAAAAGTTCATGGCAAGGGATTGTCACTAGGCTGTGGCCT
AATACCAAGTATGTGGACGTTGTCGTCACTGGAACCATGTCACAATATATATCAACCCTT
GAGTATTACAGCAGTAGCCTCCCTCTTGTCAGTACCACGTATGCTTCATCGGAATGTTCC
TTTGGAATCAACTTGAACCCGCTTTGCAAACCCAGTGAAGTTTCTTACACGCTCATTCCC
ACCATGGGTTATTTTGAGTTCTTACCAATTCACAGAATCAATAACGAAGTCAAAGACTCT
ATCTCCGTGTCCGAGTCGCAAAATGAGAAAGAACAACAACAATTAGTCGATCTGGTTGAT
GTCAAGATTGGGCAGGAGTACGAGCTTGTTGTTACCACATATTCTGGACTCTATAGATAC
AGGGTGGGTGATGTGCTTCGGGTAGCTGGATACAAGAATAATGCACCTCAGTTCACCTTC
ATTTGTCGGGAAAATGTAATCTTGAGCATTGATTCCGACAAGACTGATGAAGTTGAGCTA
CAAAATGCAGTGAAAAATGCAGAGAGTGTTCTGATACCATTCAATGCACATGTAACCGAT
TACACAAGCTATGCTGATACTTCTACCATCCCAGGCCACTATGTCGTATTCTTGGAGCTG
AGAGTGAATAGCTCTACCCCAATCTCTCCTTCAGTGTTCGAAAATTGTTGCCTCAGCATT
GAAGAATCTCTAAACAGCGTCTACCGCCAAGGCCGTGCATCTGACAAATCCATCGGACCT
CTGGAGATCAGGATAGTTGAAATTGGAACTTTCGACAAACTCATGGACTATTGCATTAGT
TTAGGTGCTTCCATAAACCAATACAAGACACCGCGGTGTGTGAAATTAACACCCCTTATT
GAGCTATTGAATTCGAGGGTCGTGTCCAGCCACTTCAGTCAAACATGTCCAAATTGGATT
CCTGGCCACAAGCAATGGAACAACATGAATTGA

Peptide Sequence

PEP ID

XP_016445719.1
PEP Infomation

PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like [Nicotiana tabacum]
Sequence

MEKTIPGREDNKKSTDCSIAEDNKAVLQFIEEVTTNVDEVQKRVLAEILSRNANVEYLQR
HNLNGHTDRETFKKVIPVITYEDIQPDINRIANGDKSPILCSQPISEFFTSSGTSGGERK
LMPIIEEDFGRRSQLYNLMISVVSQSFPDLEKGKGMYFMFVKSEAKTPGGLLARPALTSI
FKRPHFLNSNHTSPIETILCLDSYQSMYSQMLCGLCQNKEVLHVGAVFASAFIRAMRFLE
KHWSLLCNDIRTGTINAQITDPAVREAVMKILKPDPELADFIEAECSKSSWQGIVTRLWP
NTKYVDVVVTGTMSQYISTLEYYSSSLPLVSTTYASSECSFGINLNPLCKPSEVSYTLIP
TMGYFEFLPIHRINNEVKDSISVSESQNEKEQQQLVDLVDVKIGQEYELVVTTYSGLYRY
RVGDVLRVAGYKNNAPQFTFICRENVILSIDSDKTDEVELQNAVKNAESVLIPFNAHVTD
YTSYADTSTIPGHYVVFLELRVNSSTPISPSVFENCCLSIEESLNSVYRQGRASDKSIGP
LEIRIVEIGTFDKLMDYCISLGASINQYKTPRCVKLTPLIELLNSRVVSSHFSQTCPNWI
PGHKQWNNMN

Transcript Sequence

Gene sequence data has not been registered.